Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PBRM1 ENSECAG00000000555

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Description

polybromo 1 [Source:VGNC Symbol;Acc:VGNC:21184]

Location

Primary_assembly 16: 36,575,624-36,697,795 forward strand.

EquCab3.0:CM009163.1

About this gene

This gene has 10 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000004087.4	PBRM1-202	7347	1725aa	ENSECAP00000002821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6WW81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000082508.1	PBRM1-209	7701	1602aa	ENSECAP00000078069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SVR3	-
ENSECAT00000096825.1	PBRM1-210	7699	1551aa	ENSECAP00000059589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RD58	-
ENSECAT00000067425.2	PBRM1-206	7611	1618aa	ENSECAP00000052161.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PU74	-
ENSECAT00000143001.1	PBRM1-207	7566	1603aa	ENSECAP00000071123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SAD6	-
ENSECAT00000090873.1	PBRM1-205	7292	1653aa	ENSECAP00000076084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SJ17	-
ENSECAT00000061605.3	PBRM1-203	7191	1673aa	ENSECAP00000035185.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HKF3	-
ENSECAT00000004449.4	PBRM1-204	7182	1670aa	ENSECAP00000003078.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PKH0	-
ENSECAT00000078644.2	PBRM1-208	7170	1602aa	ENSECAP00000047990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PHN2	-
ENSECAT00000080685.1	PBRM1-201	7083	1639aa	ENSECAP00000059040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R4Q1	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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