Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOHLH2 ENSECAG00000000201

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Description

spermatosis and oosis specific basic helix-loop-helix 2 [Source:UniProtKB Gene Name;Acc:A0A3Q2HKP6]

Location

Primary_assembly 17: 14,965,657-15,027,071 reverse strand.

EquCab3.0:CM009164.1

About this gene

This gene has 4 transcripts (splice variants), 86 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000000201.4	SOHLH2-204	6273	448aa	ENSECAP00000000143.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CD08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000063592.3	SOHLH2-202	2081	425aa	ENSECAP00000037198.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HSP8	-
ENSECAT00000039080.3	SOHLH2-203	1976	390aa	ENSECAP00000040758.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HZP7	-
ENSECAT00000053400.3	SOHLH2-201	1456	429aa	ENSECAP00000033774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HKP6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data