Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: APAF1 ENSECAG00000024703

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Description

apoptotic peptidase activating factor 1 [Source:VGNC Symbol;Acc:VGNC:15395]

Location

Primary_assembly 28: 24,121,470-24,188,371 forward strand.

EquCab3.0:CM009175.1

About this gene

This gene has 7 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000062599.2	APAF1-202	3764	1214aa	ENSECAP00000039861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HZ39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000107326.1	APAF1-207	5843	250aa	ENSECAP00000066638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RXN5	-
ENSECAT00000041859.3	APAF1-206	5574	1159aa	ENSECAP00000043036.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I4Y2	-
ENSECAT00000033317.2	APAF1-203	3764	1214aa	ENSECAP00000039698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I1Z2	-
ENSECAT00000026769.3	APAF1-204	3740	1206aa	ENSECAP00000022365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R500	-
ENSECAT00000026768.3	APAF1-205	3632	1170aa	ENSECAP00000022364.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R504	-
ENSECAT00000057177.2	APAF1-201	1128	338aa	ENSECAP00000028165.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H3I2	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data