Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM4C ENSECAG00000024063

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Description

lysine demethylase 4C [Source:VGNC Symbol;Acc:VGNC:19338]

Location

Primary_assembly 23: 27,333,462-27,723,756 forward strand.

EquCab3.0:CM009170.1

About this gene

This gene has 9 transcripts (splice variants), 304 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000025940.4	KDM4C-203	4221	1071aa	ENSECAP00000021603.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XAR3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000030189.3	KDM4C-205	4325	1053aa	ENSECAP00000030682.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HAR2	-
ENSECAT00000140269.1	KDM4C-202	4314	1063aa	ENSECAP00000062705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RJK6	-
ENSECAT00000119787.1	KDM4C-206	4199	1011aa	ENSECAP00000076395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SNG3	-
ENSECAT00000060186.3	KDM4C-207	4160	998aa	ENSECAP00000046427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IDF2	-
ENSECAT00000062748.3	KDM4C-208	4139	991aa	ENSECAP00000026386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H0A5	-
ENSECAT00000122533.1	KDM4C-209	4016	950aa	ENSECAP00000067183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RZ80	-
ENSECAT00000110519.1	KDM4C-204	3228	986aa	ENSECAP00000061986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RJH8	-
ENSECAT00000070305.2	KDM4C-201	2690	811aa	ENSECAP00000051195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PRA9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data