Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TOX ENSECAG00000022430

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Description

thymocyte selection associated high mobility group box [Source:VGNC Symbol;Acc:VGNC:24416]

Location

Primary_assembly 9: 25,820,412-26,112,943 forward strand.

EquCab3.0:CM009156.1

About this gene

This gene has 9 transcripts (splice variants), 201 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000123185.1	TOX-205	2838	543aa	ENSECAP00000066601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RVF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000101317.1	TOX-209	3459	526aa	ENSECAP00000086644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0THW3	-
ENSECAT00000116485.1	TOX-206	3003	487aa	ENSECAP00000058002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R8N4	-
ENSECAT00000090080.1	TOX-207	2955	511aa	ENSECAP00000060086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R7R9	-
ENSECAT00000130447.1	TOX-208	2814	504aa	ENSECAP00000076083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SQ08	-
ENSECAT00000147969.1	TOX-201	2560	498aa	ENSECAP00000061187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RB25	-
ENSECAT00000112907.1	TOX-203	2542	528aa	ENSECAP00000063599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RPD6	-
ENSECAT00000046736.2	TOX-202	2482	498aa	ENSECAP00000037671.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HWG3	-
ENSECAT00000131592.1	TOX-204	2476	506aa	ENSECAP00000090351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TQ05	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data