Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: REPIN1 ENSECAG00000016405

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Description

replication initiator 1 [Source:UniProtKB Gene Name;Acc:A0A9L0SL57]

Location

Primary_assembly 4: 102,164,628-102,204,856 forward strand.

EquCab3.0:CM009151.1

About this gene

This gene has 6 transcripts (splice variants) and 81 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000112676.1	REPIN1-206	10190	627aa	ENSECAP00000069721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S4G0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000080711.1	REPIN1-205	12407	571aa	ENSECAP00000083074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T918	-
ENSECAT00000141725.1	REPIN1-204	11009	585aa	ENSECAP00000075600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SL57	-
ENSECAT00000087759.1	REPIN1-203	6696	571aa	ENSECAP00000065600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T918	-
ENSECAT00000125224.1	REPIN1-202	4589	585aa	ENSECAP00000065630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RSN9	-
ENSECAT00000017296.4	REPIN1-201	3291	584aa	ENSECAP00000014040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DUI0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data