Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITCH ENSECAG00000016216

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Description

itchy E3 ubiquitin protein ligase [Source:VGNC Symbol;Acc:VGNC:19157]

Location

Primary_assembly 22: 26,203,170-26,312,388 forward strand.

EquCab3.0:CM009169.1

About this gene

This gene has 6 transcripts (splice variants), 280 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000017728.4	ITCH-201	5272	897aa	ENSECAP00000014414.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XN76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000082218.1	ITCH-206	5834	891aa	ENSECAP00000064501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RKQ8	-
ENSECAT00000108729.1	ITCH-202	5326	862aa	ENSECAP00000064794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RPW5	-
ENSECAT00000091913.1	ITCH-203	5230	830aa	ENSECAP00000090296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TPV8	-
ENSECAT00000112355.1	ITCH-204	5185	815aa	ENSECAP00000071655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SCA5	-
ENSECAT00000108935.1	ITCH-205	5077	779aa	ENSECAP00000088780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TNR6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data