Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SETD1A ENSECAG00000015162

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Description

SET domain containing 1A, histone lysine methyltransferase [Source:VGNC Symbol;Acc:VGNC:51238]

Location

Primary_assembly 13: 19,877,351-19,903,301 reverse strand.

EquCab3.0:CM009160.1

About this gene

This gene has 4 transcripts (splice variants), 65 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000015927.4	SETD1A-203	5938	1707aa	ENSECAP00000012842.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DRS8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000134912.1	SETD1A-204	10750	1628aa	ENSECAP00000075077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SG58	-
ENSECAT00000111028.1	SETD1A-202	7611	1538aa	ENSECAP00000063009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RGD5	-
ENSECAT00000106879.1	SETD1A-201	5928	1675aa	ENSECAP00000079449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SWU8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data