Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZSCAN9 ENSECAG00000015075

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Description

zinc finger and SCAN domain containing 9 [Source:VGNC Symbol;Acc:VGNC:25418]

Location

Primary_assembly 20: 27,571,861-27,625,881 forward strand.

EquCab3.0:CM009167.1

About this gene

This gene has 5 transcripts (splice variants), 59 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000015786.4	ZSCAN9-203	1747	468aa	ENSECAP00000012718.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CA80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000084543.1	ZSCAN9-205	3183	423aa	ENSECAP00000071843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SAE2	-
ENSECAT00000015905.4	ZSCAN9-204	1665	439aa	ENSECAP00000012823.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DVR3	-
ENSECAT00000137202.1	ZSCAN9-202	750	178aa	ENSECAP00000058038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R1T0	-
ENSECAT00000142162.1	ZSCAN9-201	673	146aa	ENSECAP00000062581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RIE6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data