Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXA10 ENSECAG00000012577

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Description

homeobox A10 [Source:VGNC Symbol;Acc:VGNC:18839]

Location

Primary_assembly 4: 58,380,825-58,391,964 reverse strand.

EquCab3.0:CM009151.1

About this gene

This gene has 3 transcripts (splice variants), 83 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000080573.1	HOXA10-202	7731	451aa	ENSECAP00000083095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T9X2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000013021.4	HOXA10-201	5132	413aa	ENSECAP00000010302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RVJ6	-
ENSECAT00000103242.1	HOXA10-203	4123	224aa	ENSECAP00000083871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TC44	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data