Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNRNP40 ENSECAG00000006955

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Description

small nuclear ribonucleoprotein U5 subunit 40 [Source:VGNC Symbol;Acc:VGNC:23391]

Location

Primary_assembly 2: 25,278,940-25,311,032 forward strand.

EquCab3.0:CM009149.1

About this gene

This gene has 2 transcripts (splice variants), 219 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000007389.4	SNRNP40-202	1621	367aa	ENSECAP00000005383.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7E1N4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000146200.1	SNRNP40-201	1121	342aa	ENSECAP00000057277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R6M6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data