Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PSEN1 ENSECAG00000004387

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Description

presenilin 1 [Source:VGNC Symbol;Acc:VGNC:55303]

Location

Primary_assembly 24: 18,714,745-18,791,260 forward strand.

EquCab3.0:CM009171.1

About this gene

This gene has 4 transcripts (splice variants), 200 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000004545.4	PSEN1-204	2806	466aa	ENSECAP00000003149.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SAM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000137489.1	PSEN1-202	5691	462aa	ENSECAP00000067311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RXJ5	-
ENSECAT00000067324.2	PSEN1-203	2623	440aa	ENSECAP00000054749.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5Q2I9	-
ENSECAT00000074834.2	PSEN1-201	823	186aa	ENSECAP00000051571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PTG8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data