Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NPAS2 ENSECAG00000000171

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Description

neuronal PAS domain protein 2 [Source:VGNC Symbol;Acc:VGNC:20828]

Location

Primary_assembly 15: 8,680,346-8,839,184 reverse strand.

EquCab3.0:CM009162.1

About this gene

This gene has 3 transcripts (splice variants), 143 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000000295.3	NPAS2-201	5118	867aa	ENSECAP00000000229.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DU28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000057764.3	NPAS2-202	3962	837aa	ENSECAP00000042315.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I912	-
ENSECAT00000045739.3	NPAS2-203	3869	806aa	ENSECAP00000034397.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HKD4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data