Transcript: FBtr0342744 Upf1-RB

Description

Upf1 RNA helicase

Gene Synonyms

Upf1

Location

About this transcript

This transcript has 4 exons, is annotated with 25 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0073596	Upf1-RA	5187	1180aa	FBpp0073433	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYS3 X2JBC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0342744	Upf1-RB	4709	1180aa	FBpp0309612	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYS3 X2JBC1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 4,709 bps, Translation length: 1,180 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9VYS3

Version

FBtr0342744

Type

Protein coding

Annotation Method

Feature imported from FlyBase.