Transcript: FBtr0082586 pps-RA

Description

protein partner of snf

Gene Synonyms

pps

Location

About this transcript

This transcript has 11 exons, is annotated with 57 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0304744	pps-RB	6730	2018aa	FBpp0293286	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6G3 B8A429 C9QPJ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0082586	pps-RA	6724	2016aa	FBpp0082058	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VG78	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 6,724 bps, Translation length: 2,016 residues

Version

FBtr0082586

Type

Protein coding

Annotation Method

Feature imported from FlyBase.