Transcript: FBtr0089913 salm-RA

Description

spalt major

Gene Synonyms

salm

Location

About this transcript

This transcript has 4 exons, is annotated with 85 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0089913	salm-RA	6118	1365aa	FBpp0088852	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P39770	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0343619	salm-RB	6114	1355aa	FBpp0310214	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JA59	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 6,118 bps, Translation length: 1,365 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P39770

Version

FBtr0089913

Type

Protein coding

Annotation Method

Feature imported from FlyBase.