Transcript: FBtr0075945 Atg1-RA

Description

Autophagy-related 1

Gene Synonyms

Atg1

Location

About this transcript

This transcript has 12 exons, is annotated with 30 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0300561	Atg1-RB	3446	855aa	FBpp0289788	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MQJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0075945	Atg1-RA	4088	835aa	FBpp0075677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VU14	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,088 bps, Translation length: 835 residues

Version

FBtr0075945

Type

Protein coding

Annotation Method

Feature imported from FlyBase.