Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: FBtr0340670 Snx27-RD

Description

Sorting nexin 27

Gene Synonyms

Snx27

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features and maps to 75 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0070843	Snx27-RA	2904	531aa	FBpp0070808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W486	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0340670	Snx27-RD	3596	430aa	FBpp0309512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JIH1	-
FBtr0339525	Snx27-RC	3273	443aa	FBpp0308608	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YD98	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,596 bps, Translation length: 430 residues

Version

FBtr0340670

Type

Protein coding

Annotation Method

Feature imported from FlyBase.