Transcript: FBtr0085267 NSD-RA

Description

Nuclear receptor binding SET domain protein

Gene Synonyms

NSD

Location

About this transcript

This transcript has 5 exons, is annotated with 60 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0085267	NSD-RA	4589	1427aa	FBpp0084636	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MT36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0335014	NSD-RB	4577	1423aa	FBpp0307022	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHR6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,589 bps, Translation length: 1,427 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8MT36

Version

FBtr0085267

Type

Protein coding

Annotation Method

Feature imported from FlyBase.