Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
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External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: FBtr0344228 SCCRO4-RE

Description

Squamous cell carcinoma-related oncogene 4

Gene Synonyms

SCCRO4

Location

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0074838	SCCRO4-RB	1947	248aa	FBpp0074607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0332775	SCCRO4-RD	1427	213aa	FBpp0305010	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRX5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0074837	SCCRO4-RA	1295	248aa	FBpp0074606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB1	-
FBtr0344228	SCCRO4-RE	1289	248aa	FBpp0310634	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB1	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,289 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9VWB1

Version

FBtr0344228

Type

Protein coding

Annotation Method

Feature imported from FlyBase.