Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: FBtr0087952 Nup54-RA

Description

Nucleoporin 54kD

Gene Synonyms

Nup54

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0087952	Nup54-RA	2048	610aa	FBpp0087063	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RVF6 Q9V6B9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,048 bps, Translation length: 610 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9V6B9

Version

FBtr0087952

Type

Protein coding

Annotation Method

Feature imported from FlyBase.