Transcript: FBtr0088405 egr-RA

Description

eiger

Gene Synonyms

egr

Location

About this transcript

This transcript has 7 exons, is annotated with 28 domains and features and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0088405	egr-RA	2166	415aa	FBpp0087493	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MUJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0088406	egr-RB	2148	409aa	FBpp0087494	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,166 bps, Translation length: 415 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8MUJ1

Version

FBtr0088405

Type

Protein coding

Annotation Method

Feature imported from FlyBase.