Transcript: FBtr0088654 PAN2-RA

Description

Poly(A)-binding protein-dependent poly(A) ribonuclease 2

Gene Synonyms

PAN2

Location

About this transcript

This transcript has 15 exons, is annotated with 25 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0088654	PAN2-RA	4051	1241aa	FBpp0087735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7K9 Q8MRI7 Q8SWW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0339303	PAN2-RB	4048	1240aa	FBpp0308411	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LEY4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 4,051 bps, Translation length: 1,241 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1Z7K9

Version

FBtr0088654

Type

Protein coding

Annotation Method

Feature imported from FlyBase.