Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0344857 CG5390-RB

Gene Synonyms

CG5390

Location

About this transcript

This transcript has 4 exons, is annotated with 26 domains and features and maps to 29 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0080064	CG5390-RA	1401	406aa	FBpp0079653	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86PE8 Q9VL01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0344857	CG5390-RB	1372	406aa	FBpp0311172	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VL01	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,372 bps, Translation length: 406 residues

Version

FBtr0344857

Type

Protein coding

Annotation Method

Feature imported from FlyBase.