Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0072148 alpha-Catr-RA

Description

alpha-catenin related

Gene Synonyms

alpha-Catr

Location

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features and maps to 28 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0330254	alpha-Catr-RC	3007	810aa	FBpp0303286	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHD7 C6TP52 Q29QH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0072148	alpha-Catr-RA	3007	787aa	FBpp0072057	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U523 Q9W1F1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,007 bps, Translation length: 787 residues

Version

FBtr0072148

Type

Protein coding

Annotation Method

Feature imported from FlyBase.