Transcript: FBtr0080585 NimB1-RA

Description

Nimrod B1

Gene Synonyms

NimB1

Location

About this transcript

This transcript has 4 exons, is annotated with 21 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0310074	NimB1-RB	1289	403aa	FBpp0301775	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D9IQC6 M9PFV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0080585	NimB1-RA	1286	402aa	FBpp0080162	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJU9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,286 bps, Translation length: 402 residues

Version

FBtr0080585

Type

Protein coding

Annotation Method

Feature imported from FlyBase.