Transcript: FBtr0087501 Su(var)2-HP2-RA

Description

Su(var)2-HP2

Gene Synonyms

Su(var)2-HP2

Location

About this transcript

This transcript has 9 exons, is annotated with 113 domains and features and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0087501	Su(var)2-HP2-RA	10289	3257aa	FBpp0086630	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9S6 Q960Y9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
FBtr0087502	Su(var)2-HP2-RB	5417	1633aa	FBpp0086631	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9S5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 10,289 bps, Translation length: 3,257 residues

Version

FBtr0087501

Type

Protein coding

Annotation Method

Feature imported from FlyBase.