Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0071279 Lim1-RA

Description

LIM homeobox 1

Gene Synonyms

Lim1

Location

About this transcript

This transcript has 7 exons, is annotated with 34 domains and features and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0071279	Lim1-RA	3081	505aa	FBpp0071216	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V472	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0331732	Lim1-RB	2708	347aa	FBpp0304121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PJE4	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,081 bps, Translation length: 505 residues

Version

FBtr0071279

Type

Protein coding

Annotation Method

Feature imported from FlyBase.