Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0070502 Spg7-RA

Description

Paraplegin

Gene Synonyms

Spg7

Location

About this transcript

This transcript has 7 exons, is annotated with 33 domains and features and maps to 29 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0345716	Spg7-RC	3360	819aa	FBpp0311759	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0070502	Spg7-RA	3029	819aa	FBpp0070479	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O76867 Q8MT03 Q9W4W8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,029 bps, Translation length: 819 residues

Version

FBtr0070502

Type

Protein coding

Annotation Method

Feature imported from FlyBase.