Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: FBtr0334933 Scp1-RB

Description

Sarcoplasmic calcium-binding protein 1

Gene Synonyms

Scp1

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features and maps to 15 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0334933	Scp1-RB	1198	189aa	FBpp0306952	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O16157 Q8MSI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0113713	Scp1-RA	984	189aa	FBpp0112436	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSI2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,198 bps, Translation length: 189 residues

Version

FBtr0334933

Type

Protein coding

Annotation Method

Feature imported from FlyBase.