Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: FBtr0078836 opa-RA

Description

odd paired

Gene Synonyms

opa

Location

About this transcript

This transcript has 3 exons, is annotated with 45 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0479794	opa-RB	2939	688aa	FBpp0428127	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EF55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0078836	opa-RA	2939	609aa	FBpp0078477	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P39768	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,939 bps, Translation length: 609 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P39768

Version

FBtr0078836

Type

Protein coding

Annotation Method

Feature imported from FlyBase.