Transcript: FBtr0074798 Nup205-RB

Description

Nucleoporin 205kD

Gene Synonyms

Nup205

Location

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0074798	Nup205-RB	6470	2090aa	FBpp0074567	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YI09 A9YI11 A9YI14 Q8IQV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0074799	Nup205-RA	6401	2067aa	FBpp0074568	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YI10 Q9VWB8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 6,470 bps, Translation length: 2,090 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IQV9

Version

FBtr0074798

Type

Protein coding

Annotation Method

Feature imported from FlyBase.