Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Pi4KIIalpha FBgn0037339

.

Description

Phosphatidylinositol 4-kinase II alpha

Gene Synonyms

Pi4KIIalpha

Location

Primary_assembly 3R: 5,557,663-5,563,652 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 426 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0078756	Pi4KIIalpha-RA	3122	710aa	FBpp0089178	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6W4K4 Q8STF7 Q9VND3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0078757	Pi4KIIalpha-RC	3095	710aa	FBpp0089179	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VND3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0479746	Pi4KIIalpha-RE	2718	480aa	FBpp0428089	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6F7SG83	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0078755	Pi4KIIalpha-RB	2565	563aa	FBpp0078404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I0B7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0479926	Pi4KIIalpha-RF	2044	457aa	FBpp0428258	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EES5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.