Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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External references
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ID History
- Gene history

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Gene: CG40045 FBgn0058045

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Gene Synonyms

CG40045

Location

Primary_assembly 3L: 24,028,515-24,035,859 forward strand.

BDGP6.54:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 227 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0111163	CG40045-RA	740	168aa	FBpp0110481	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SYG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0331585	CG40045-RC	881	132aa	FBpp0303975	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDD4	-
FBtr0304740	CG40045-RB	868	97aa	FBpp0293282	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DME9	-
FBtr0331586	CG40045-RD	737	167aa	FBpp0303976	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PG40	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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