Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: Usp15-31 FBgn0050421

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Description

Ubiquitin specific protease 15/31

Gene Synonyms

Usp15-31

Location

Primary_assembly 2R: 24,743,749-24,756,976 forward strand.

BDGP6.54:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 1 orthologue and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0072369	Usp15-31-RA	5225	1272aa	FBpp0072276	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95SG4 Q9W117	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0343494	Usp15-31-RB	5141	1244aa	FBpp0310101	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGJ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0343495	Usp15-31-RC	4550	1244aa	FBpp0310102	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGJ1 Q8MRY2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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