Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rpn13 FBgn0033886

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Description

Regulatory particle non-ATPase 13

Gene Synonyms

Rpn13

Location

Primary_assembly 2R: 13,958,545-13,960,404 reverse strand.

BDGP6.54:AE013599.5

About this gene

This gene has 6 transcripts (splice variants), 259 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0114494	Rpn13-RE	1495	424aa	FBpp0112986	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFA6 B4F548	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0339958	Rpn13-RG	1495	424aa	FBpp0308980	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0114493	Rpn13-RD	1482	424aa	FBpp0112985	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0087611	Rpn13-RB	1390	389aa	FBpp0086737	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K2G1	-
FBtr0114495	Rpn13-RF	1390	389aa	FBpp0112987	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F546 B4F547 C0ML32 Q7K2G1	-
FBtr0087610	Rpn13-RA	1377	389aa	FBpp0086736	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K2G1	-

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Summary

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