Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: PAN2 FBgn0033352

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Description

Poly(A)-binding protein-dependent poly(A) ribonuclease 2

Gene Synonyms

PAN2

Location

Primary_assembly 2R: 8,928,169-8,933,103 forward strand.

BDGP6.54:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 225 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0088654	PAN2-RA	4051	1241aa	FBpp0087735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7K9 Q8MRI7 Q8SWW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0339303	PAN2-RB	4048	1240aa	FBpp0308411	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LEY4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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