Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lis-1 FBgn0015754

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Description

Lissencephaly-1

Gene Synonyms

Lis-1

Location

Primary_assembly 2R: 16,178,826-16,185,103 forward strand.

BDGP6.54:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 285 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0087241	Lis-1-RF	3292	411aa	FBpp0089100	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K812 Q7KNS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0087236	Lis-1-RA	2862	411aa	FBpp0086375	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K812 Q7KNS3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0087240	Lis-1-RB	2775	411aa	FBpp0086379	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K812 Q7KNS3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0304747	Lis-1-RG	1675	411aa	FBpp0293289	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K812 Q7KNS3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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