Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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Molecular interactions
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Supporting evidence
ID History
- Gene history

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Gene: RpL40 FBgn0003941

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Description

Ribosomal protein L40

Gene Synonyms

RpL40

Location

Primary_assembly 2L: 4,227,699-4,228,561 forward strand.

BDGP6.54:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 337 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0334787	RpL40-RB	659	128aa	FBpp0306837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18101 Q7JYK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0077470	RpL40-RA	587	128aa	FBpp0077159	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18101 Q7JYK1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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