Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pu FBgn0003162

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Description

Punch

Gene Synonyms

Pu

Location

Primary_assembly 2R: 21,175,315-21,182,608 forward strand.

BDGP6.54:AE013599.5

About this gene

This gene has 3 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0071580	Pu-RA	1793	324aa	FBpp0071507	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P48596	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0071579	Pu-RC	1744	308aa	FBpp0071506	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E4NKN2	-
FBtr0071578	Pu-RB	1625	273aa	FBpp0071505	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP60 D8FT24	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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