Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nanos FBgn0002962

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Description

nanos

Gene Synonyms

nanos

Location

Primary_assembly 3R: 19,157,238-19,160,202 forward strand.

BDGP6.54:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 622 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0083732	nanos-RA	2349	401aa	FBpp0083146	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A075BHZ2 A0A075BJ43 A0A075BJ46 A0A075BJA6 A0A075BJP4 A0A075BJP7 A0A075BLQ5 G7H7Y6 P25724 Q8SY38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0335019	nanos-RB	2292	382aa	FBpp0307025	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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