Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
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Genetic Variation
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Gene: GEFmeso FBgn0050115

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Description

Guanine nucleotide exchange factor in mesoderm

Gene Synonyms

GEFmeso

Location

Primary_assembly 2R: 18,554,119-18,611,777 reverse strand.

BDGP6.54:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 3 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0300421	GEFmeso-RE	5909	1549aa	FBpp0289650	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZBA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0310055	GEFmeso-RF	6170	878aa	FBpp0301756	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFB7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0340387	GEFmeso-RG	5600	1237aa	FBpp0309333	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DN64 Q8MSP7 Q961L9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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