Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Genetic Variation
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Gene: CG1024 FBgn0027514

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Gene Synonyms

CG1024

Location

Primary_assembly 3R: 6,377,349-6,380,328 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0332175	CG1024-RD	2570	543aa	FBpp0304484	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9A0M7 Q9XZ30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0332176	CG1024-RE	2506	543aa	FBpp0304485	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9A0M7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0290212	CG1024-RB	1870	539aa	FBpp0288651	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI18	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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