Transcript: ENSDART00000166969.2 chd5-202

Description

chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]

Location

About this transcript

This transcript has 41 exons, is annotated with 79 domains and features, is associated with 2029 variant alleles and maps to 628 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166969.2	chd5-202	9290	1980aa	ENSDARP00000133704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJ89	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191646.1	chd5-203	8788	1630aa	ENSDARP00000152266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QC65	-
ENSDART00000193935.1	chd5-204	8704	1602aa	ENSDARP00000154248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QGR4	-
ENSDART00000162587.2	chd5-201	8620	1574aa	ENSDARP00000135126.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IM65	-

Summary

Statistics

Exons: 41, Coding exons: 41, Transcript length: 9,290 bps, Translation length: 1,980 residues

Version

ENSDART00000166969.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.