Transcript: ENSDART00000162523.2 kdm4b-201

Description

lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]

Gene Synonyms

jmjd2b, si:ch211-124a3.4

Location

About this transcript

This transcript has 22 exons, is annotated with 44 domains and features, is associated with 1400 variant alleles and maps to 238 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162523.2	kdm4b-201	5293	1134aa	ENSDARP00000133766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181893.1	kdm4b-202	6806	1134aa	ENSDARP00000156548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUQ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 5,293 bps, Translation length: 1,134 residues

Version

ENSDART00000162523.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.