Transcript: ENSDART00000153214.2 synpo2lb-202

Description

synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]

Gene Synonyms

chap1, im:7159270

Location

About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 515 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153214.2	synpo2lb-202	5501	1184aa	ENSDARP00000127295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAM7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000113978.4	synpo2lb-201	6314	1053aa	ENSDARP00000099972.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R899	-
ENSDART00000185779.1	synpo2lb-203	5969	879aa	ENSDARP00000152649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RTS6	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,501 bps, Translation length: 1,184 residues

Version

ENSDART00000153214.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.