Transcript: ENSDART00000148259.3 gabrb2a-202

Description

gamma-aminobutyric acid type A receptor beta2 subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-8196]

Gene Synonyms

fj59e04, gabrb2, si:ch211-215g18.1, wu:fj59e04, zgc:136311

Location

About this transcript

This transcript has 6 exons, is annotated with 26 domains and features, is associated with 752 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114750.4	gabrb2a-201	3200	436aa	ENSDARP00000104215.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R406	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148259.3	gabrb2a-202	907	290aa	ENSDARP00000114799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE94	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000170532.2	gabrb2a-203	880	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 907 bps, Translation length: 290 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148259.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.