Transcript: ENSDART00000147168.2 rock2b-201

Description

rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]

Gene Synonyms

cb64, sb:cb64, si:dkey-65b13.10, si:dkey-65b13.7

Location

Chromosome 20: 33,669,346-33,675,676 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 265 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004877.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166573.2	rock2b-206	5158	1401aa	ENSDARP00000137413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000157427.2	rock2b-204	4206	1401aa	ENSDARP00000136393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R417	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000147168.2	rock2b-201	735	245aa	ENSDARP00000117860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RH75	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000164401.2	rock2b-205	801	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153420.2	rock2b-203	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152839.3	rock2b-202	473	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 735 bps, Translation length: 245 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000147168.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147168.2 rock2b-201

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Transcript: ENSDART00000147168.2 rock2b-201

Summary

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