Transcript: ENSDART00000146861.3 mmp16b-202

Description

matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]

Gene Synonyms

si:ch211-261f3.1

Location

About this transcript

This transcript has 10 exons, is annotated with 40 domains and features, is associated with 15 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146861.3	mmp16b-202	3087	618aa	ENSDARP00000121807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8N4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081833.5	mmp16b-201	1785	594aa	ENSDARP00000076272.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q608	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,087 bps, Translation length: 618 residues

Version

ENSDART00000146861.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.