Transcript: ENSDART00000146804.3 kirrel1b-202

Description

kirre like nephrin family adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-070912-173]

Gene Synonyms

Neph1b, kirrelb, si:ch211-195h23.2

Location

About this transcript

This transcript has 15 exons, is annotated with 37 domains and features, is associated with 1658 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079582.4	kirrel1b-201	2525	790aa	ENSDARP00000074034.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DHL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000146804.3	kirrel1b-202	3919	778aa	ENSDARP00000115926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1H1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,919 bps, Translation length: 778 residues

Version

ENSDART00000146804.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.